311 Fair Lane
Placerville, CA 95667
brallen@ucanr.edu
Also in:
Amador County
Calaveras County
El Dorado County
Tuolumne County
Bibliography
Peer Reviewed
Neale, D. B., Zimin, A. V., Meltzer, A., Bhattarai, A., Amee, M., Figueroa Corona, L., ... & Wegrzyn, J. L. (2023). A genome sequence for the threatened whitebark pine. bioRxiv, 2023-11.
Neale, D.B., Zimin, A.V., Zaman, S., Scott, A.D., Shrestha, B., Workman, R.E, Puiu, D., Allen, B.J., Sekhwal, M.K., De La Torre, A.R., McGuire, P.E., Burns, E., Timp, W., Wegrzyn, J.L., & Salzberg, S.L. (2021) Assembled and annotated 26.5 Gbp coast redwood genome: a resource for estimating its evolutionary adaptive potential and investigating the origin of its hexaploidy. G3, 12(1), 110.
De La Torre, A.R., Wilhite, B., Puiu, D., St Clair, J.B., Crepeau, M.W., Salzberg, S.L., Langley, C.H., Allen, B.J., & Neale, D.B. (2021) Dissecting the polygenic basis of cold adaptation using genome-wide association of traits and environmental data in Douglas-fir. Genes, 12(1): 110.
De la Torre, A., Sekhwal, M., Puiu, D., Salzberg, S., Scott, A., Allen, B., Neale, D.B., Chin, A., Buckley, T. (2021) Genome-wide association identifies candidate genes for drought tolerance in coast redwood and giant sequoia. The Plant Journal, 109(1), 7-22.
D’Amico-Willman, K.M., Sideli, G.M., Allen, B.J., Anderson, E.S., Gradziel, T.M., FresnedoRamírez, J. (2021) Identification of putative markers of Non-Infectious bud failure in almond (Prunus dulcis [Mill] D.A. Webb) through genome wide DNA methylation profiling and gene expression analysis in an almond x peach hybrid population. Frontiers in Plant Science, 13, 5.
Sideli, G.M., McAtee, P., Marrano, A., Allen, B.J., Brown, P.J., Butterfield, T.S., Dandekar, A.M., Leslie, C.A., & Neale, D.B. (2020) Genetic Analysis of Walnut (Juglans regia L.) Pellicle Pigment Variation Through a Novel, High-Throughput Phenotyping Platform. G3: Genes, Genomes, Genetics, 10(12): 4411-4424.
Marrano, A., Britton, M., Zaini, P.A., Zimin, A., Workman, R., Puiu, D., Bianco, L., Di Pierro, E.A., Allen, B.J., Chakraborty, S., Troggio, M., Leslie, C.A., Timp, W., Dandekar, A., Salzberg, S.L., Neale, D.B. (2020) High-quality chromosome-scale assembly of the walnut (Juglans regia L) reference genome. Gigascience.
Sideli, G.M., Marrano, A., Montanari, S., Leslie, C.A., Allen, B.J., Cheng, H., Brown, P.J., Neale, D.B. (2020) Quantitative phenotyping of shell suture strength in walnut (Juglans regia L.) enhances precision for detection of QTL and genome-wide association mapping. PloS one, 15(4), e0231144.
Montanari, S., Bianco, L., Allen, B.J., Marti?nez-Garci?a, P.J., Bassil, N.V., Postman, J., Kna?bel, M., Kitson, B., Deng, C.H., Change?, D., Crepeau, M.W., Langley, C., Evans, K., Dhingra, A., Troggio, M., Neale, D.B. (2019). Development of a highly efficient AxiomTM 70 K SNP array for Pyrus and evaluation for high-density mapping and germplasm characterization. BMC genomics, 20(1), 1-18.
Mackey, T.J., Sumner, D.Y., Hawes, I., Jungblut, A.D., Lawrence, J., Leidman, S., & Allen, B. (2017) Increased mud deposition reduces stromatolite complexity. Geology, 45(7), 663- 666.
Non-Peer Reviewed
- Allen, B. (2023). 2022 Survey Results. Data by Growers for Growers. North American Truffle Growers Association. https://ucanr.edu/sites/csnce/files/385723.pdf
- Allen, B.J.; Audoin, F., et al. (2023). 2023 Virtual Fence Workshop Survey Results. https://cecentralsierra.ucanr.edu/Virtual_Fencing/
- Audoin, F.; Allen, B., et al. (2023). Successful “Virtual Fence” workshop in Sutter Creek, Amador County. Central Sierra eNewsletter.
- Allen, B.J.; Audoin, F., et al. (2023). Virtual Fencing (VF) Information Sheet.
ANR Workgroup Associations
- UAS (Drones) Workgroup - Member