311 Fair Lane
Placerville, CA 95667
brallen@ucanr.edu
Also in:
Amador County
Calaveras County
El Dorado County
Tuolumne County
Bibliography
Peer Reviewed
Coleman, M. D., Berch, S., Bonito, G., Allen, B., Andrews, E., Arechiga Carvajal, E. T., ... & Smith, M. E. (2024). Status of truffle science and cultivation in North America. Plant and Soil, 1-37.
Neale, D. B., Zimin, A. V., Meltzer, A., Bhattarai, A., Amee, M., Figueroa Corona, L., ... & Wegrzyn, J. L. (2024). A genome sequence for the threatened whitebark pine. G3: Genes, Genomes, Genetics, 14(5), jkae061.
Neale, D.B., Zimin, A.V., Zaman, S., Scott, A.D., Shrestha, B., Workman, R.E, Puiu, D., Allen, B.J., Sekhwal, M.K., De La Torre, A.R., McGuire, P.E., Burns, E., Timp, W., Wegrzyn, J.L., & Salzberg, S.L. (2021) Assembled and annotated 26.5 Gbp coast redwood genome: a resource for estimating its evolutionary adaptive potential and investigating the origin of its hexaploidy. G3, 12(1), 110.
De La Torre, A.R., Wilhite, B., Puiu, D., St Clair, J.B., Crepeau, M.W., Salzberg, S.L., Langley, C.H., Allen, B.J., & Neale, D.B. (2021) Dissecting the polygenic basis of cold adaptation using genome-wide association of traits and environmental data in Douglas-fir. Genes, 12(1): 110.
De la Torre, A., Sekhwal, M., Puiu, D., Salzberg, S., Scott, A., Allen, B., Neale, D.B., Chin, A., Buckley, T. (2021) Genome-wide association identifies candidate genes for drought tolerance in coast redwood and giant sequoia. The Plant Journal, 109(1), 7-22.
D’Amico-Willman, K.M., Sideli, G.M., Allen, B.J., Anderson, E.S., Gradziel, T.M., FresnedoRamírez, J. (2021) Identification of putative markers of Non-Infectious bud failure in almond (Prunus dulcis [Mill] D.A. Webb) through genome wide DNA methylation profiling and gene expression analysis in an almond x peach hybrid population. Frontiers in Plant Science, 13, 5.
Sideli, G.M., McAtee, P., Marrano, A., Allen, B.J., Brown, P.J., Butterfield, T.S., Dandekar, A.M., Leslie, C.A., & Neale, D.B. (2020) Genetic Analysis of Walnut (Juglans regia L.) Pellicle Pigment Variation Through a Novel, High-Throughput Phenotyping Platform. G3: Genes, Genomes, Genetics, 10(12): 4411-4424.
Marrano, A., Britton, M., Zaini, P.A., Zimin, A., Workman, R., Puiu, D., Bianco, L., Di Pierro, E.A., Allen, B.J., Chakraborty, S., Troggio, M., Leslie, C.A., Timp, W., Dandekar, A., Salzberg, S.L., Neale, D.B. (2020) High-quality chromosome-scale assembly of the walnut (Juglans regia L) reference genome. Gigascience.
Sideli, G.M., Marrano, A., Montanari, S., Leslie, C.A., Allen, B.J., Cheng, H., Brown, P.J., Neale, D.B. (2020) Quantitative phenotyping of shell suture strength in walnut (Juglans regia L.) enhances precision for detection of QTL and genome-wide association mapping. PloS one, 15(4), e0231144.
Montanari, S., Bianco, L., Allen, B.J., Marti?nez-Garci?a, P.J., Bassil, N.V., Postman, J., Kna?bel, M., Kitson, B., Deng, C.H., Change?, D., Crepeau, M.W., Langley, C., Evans, K., Dhingra, A., Troggio, M., Neale, D.B. (2019). Development of a highly efficient AxiomTM 70 K SNP array for Pyrus and evaluation for high-density mapping and germplasm characterization. BMC genomics, 20(1), 1-18.
Mackey, T.J., Sumner, D.Y., Hawes, I., Jungblut, A.D., Lawrence, J., Leidman, S., & Allen, B. (2017) Increased mud deposition reduces stromatolite complexity. Geology, 45(7), 663- 666.
Non-Peer Reviewed
Oneto, S.; Allen, B. (2024). Controlling Brush, Weeds and Woody Regrowth Following Mastication. 11. October. https://ucanr.edu/sites/csnce/files/404642.pdf
Oneto, S.; Allen, B. (2024). Controlling Brush, Weeds and Woody Regrowth Following Mastication. California Weed Science Society Research Update and News. 16:1, 27-35. July. https://cwss.org/wp-content/uploads/2024/07/CWSS_-July-2024-Issue.pdf
Allen, B., Berch, S., Oviatt, P., Bonito, G., Long, P., Upchurch, D., Scanlon, A., and Oneto, S. 2024. North American Truffle Growers Annual Report 2023.
- Allen, B. (2023). 2022 Survey Results. Data by Growers for Growers. North American Truffle Growers Association. https://ucanr.edu/sites/csnce/files/385723.pdf
- Allen, B.J.; Audoin, F., et al. (2023). 2023 Virtual Fence Workshop Survey Results. https://cecentralsierra.ucanr.edu/Virtual_Fencing/
Audoin, F.; Oneto, S., et al. (2023). Rim Fire 10 Years Later: 2023 Range Tour and Conference in Tuolumne County. 3. https://files.constantcontact.com/8d1fe2b4201/28279d23-ea9c-454b-ae02-af05d1b75ec2.pdf
Audoin, F.; Oneto, S., et al. (2023). Successful “Virtual Fence” workshop in Sutter Creek, Amador County. Central Sierra eNewsletter. August. https://files.constantcontact.com/8d1fe2b4201/91429be5-7ac7-4815-bf53-4972930f3df2.pdf
- Audoin, F.; Allen, B., et al. (2023). Successful “Virtual Fence” workshop in Sutter Creek, Amador County. Central Sierra eNewsletter.
- Allen, B.J.; Audoin, F., et al. (2023). Virtual Fencing (VF) Information Sheet.
ANR Workgroup Associations
- Rangeland Technology, Innovation, and Practice - Member
- UAS (Drones) Workgroup - Member